tag:blogger.com,1999:blog-17889588.post4114902018573575992..comments2024-03-13T07:14:55.283+01:00Comments on chem-bla-ics: My PhD Thesis: in color and grayscaleEgon Willighagenhttp://www.blogger.com/profile/07470952136305035540noreply@blogger.comBlogger6125tag:blogger.com,1999:blog-17889588.post-31046468272238666392008-02-05T09:00:00.000+01:002008-02-05T09:00:00.000+01:00Yup. It takes the masses from CE-MS and compares t...Yup. It takes the masses from CE-MS and compares to an in-house metabolite database, and of course takes into account common adduct products and isotopes. Really nice and straightforward stuff. It's completely written in php and I'm considering running it as a simple server side operation since most biologists and analytical chemists get scared of dos prompts.<BR/><BR/>MitchAnonymousnoreply@blogger.comtag:blogger.com,1999:blog-17889588.post-46346416143399717312008-02-03T10:31:00.000+01:002008-02-03T10:31:00.000+01:00Hi Mitch,similar kind of things. Right now, our wo...Hi Mitch,<BR/><BR/>similar kind of things. Right now, our work focuses on GC/MS and LC/MS data, and we work on setting up webservices for metabolomics at Plant Research International (<A HREF="http://www.pri.wur.nl/" REL="nofollow">www.pri.wur.nl</A>), and we work on the opensource project <A HREF="http://chem-bla-ics.blogspot.com/2007/11/metware-metabolomics-database-project.html" REL="nofollow">MetWare</A>.<BR/><BR/>What are your scripts doing? Are they working in the data preprocessing step? Talking mass or NMR spectra and compare against databases?Egon Willighagenhttps://www.blogger.com/profile/07470952136305035540noreply@blogger.comtag:blogger.com,1999:blog-17889588.post-84784742239909245342008-02-03T10:24:00.000+01:002008-02-03T10:24:00.000+01:00You do metabolomics work too? I tend to work on it...You do metabolomics work too? I tend to work on it as a hobby in my spare time. I've been writing scripts to do faster mass spectrometry metabolite id. What do you do?Anonymousnoreply@blogger.comtag:blogger.com,1999:blog-17889588.post-78049050857670634442008-02-01T07:35:00.000+01:002008-02-01T07:35:00.000+01:00Eric, good suggestion. Won't work for me this time...Eric, good suggestion. Won't work for me this time, though: I have the resources for each chapter in separate subfolder... as they have been published as individual papers too... but will remember this for next time!Egon Willighagenhttps://www.blogger.com/profile/07470952136305035540noreply@blogger.comtag:blogger.com,1999:blog-17889588.post-55937431019554947952008-01-31T17:23:00.000+01:002008-01-31T17:23:00.000+01:00Yes, swapping graphicspath is much less typing lat...Yes, swapping graphicspath is much less typing later on. Did that too ;-)<BR/><BR/>Yours,<BR/>SteffenAnonymousnoreply@blogger.comtag:blogger.com,1999:blog-17889588.post-40613931102001017102008-01-23T17:42:00.000+01:002008-01-23T17:42:00.000+01:00Another method would be to wrap the graphicspath c...Another method would be to wrap the graphicspath command from graphicx in an opt command and then just separate color and greyscale figures into two different directories.<BR/><BR/>\opt{color}{\graphicspath{{figs-color/}}<BR/>\opt{grey}{\graphicspath{{figs-grey/}}<BR/><BR/>Just a though.Unknownhttps://www.blogger.com/profile/15397038518267760057noreply@blogger.com