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Sunday, March 20, 2022

Bacting, pyBacting, and Google Colab

Last year the Bacting paper was published (doi:10.21105/joss.02558) and later Charles wrapped this in the pybacting package so Bioclipse scripts can be run in Python. We discussed how to update the A lot of Bioclipse Scripting Language examples ebook with Python examples. I already tested earlier if the scripts worked in Google Colab (it did), but I had not gotten to adding a link to the ebook to open a script in Colab. Until today. Here's an example code snippet from the book:

Clicking the Open in Google Colab link resulting in this page:


With thanks to this Python to Jupyter notebook convertor!


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